* Prediction your proteins by CapsNet-SSP

1. The system will send a Email to the submitted address when the prediction are finished;
2. Input some sequences of proteins as FASTA format;
3. Upload a fasta file including many sequences of proteins.

* Prediction your proteins result page

1. The raw CapsNet-SSP output; right click to download;
2. The tabular output of CapsNet-SSP prediction;
3. The parsed CapsNet-SSP result:
   (1) Query name:The name of input proteins,
   (2) S-value:S-value of prediction proteins, which is defined by S=2×(arg max(p)-0.5)×max(p), where p is the result of the softmax output from CapsNet-SSP, and arg max(p) represents the indices of the maximum values.
   (3) Salivary secretory protein by prediction:The prediction results of salivary secretory,
   
4. Search: typing in any letters/words can search any columns of the table.

* Salivary secretory proteins browse page

1. Uniprot ID:Proteins ID from Uniprot;
2. S-value:S-value of prediction proteins, which is defined by S=2×(arg max(p)-0.5)×max(p), where p is the result of the softmax output from CapsNet-SSP, and arg max(p) represents the indices of the maximum values;
3. Validation by proteomics:If one protein is validated by proteomics as salivary secretory protein in exist literatures, the property is "Yes";
4. Proteins Name from Uniprot.
5. Search: typing in any letters/words can search any columns of the table.

Cite us

Du W, Sun Y, Li G, et al. CapsNet-SSP: multilane capsule network for predicting human saliva-secretory proteins[J]. BMC Bioinformatics, 2020, 21(1): 1-17.